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CAZyme Information: PSURA_78172T0-p1

You are here: Home > Sequence: PSURA_78172T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_78172T0-p1
CAZy Family GH30
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
385 39440.54 3.3677
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_78172T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 15 256 1.2e-76 0.9224489795918367

CDD Domains      help

PSURA_78172T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.25e-137 1 385 1 347
2.25e-137 1 385 1 347
1.53e-136 6 380 1 347
2.59e-136 1 385 1 347
1.05e-135 1 385 1 347

PDB Hits      help

PSURA_78172T0-p1 has no PDB hit.

Swiss-Prot Hits      help

PSURA_78172T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000229 0.999742 CS pos: 24-25. Pr: 0.9799

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_78172T0-p1.