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CAZyme Information: PSURA_78170T0-p1

You are here: Home > Sequence: PSURA_78170T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_78170T0-p1
CAZy Family GH30
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
322 PramPr-102_SC0029|CGC4 33317.13 4.4033
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_78170T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 23 191 8.7e-21 0.9880239520958084

CDD Domains      help

PSURA_78170T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.10e-14 82 199 73 190
6.68e-14 8 196 5 189
1.38e-13 8 198 5 195
1.47e-13 14 199 8 188
1.98e-13 2 197 4 195

PDB Hits      help

PSURA_78170T0-p1 has no PDB hit.

Swiss-Prot Hits      help

PSURA_78170T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.248665 0.751298 CS pos: 22-23. Pr: 0.6670

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_78170T0-p1.