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CAZyme Information: PSURA_78169T0-p1

You are here: Home > Sequence: PSURA_78169T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_78169T0-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
390 39062.28 3.9220
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_78169T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 14 249 3e-75 0.9142857142857143

CDD Domains      help

PSURA_78169T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.01e-120 10 213 10 213
3.61e-120 13 213 11 211
7.94e-120 10 213 10 213
1.03e-119 13 213 11 211
1.29e-118 10 213 10 213

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.58e-11 101 196 70 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PSURA_78169T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.007029 0.992938 CS pos: 23-24. Pr: 0.9548

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_78169T0-p1.