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CAZyme Information: PSURA_78165T0-p1

You are here: Home > Sequence: PSURA_78165T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_78165T0-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
312 PramPr-102_SC0029|CGC2 32229.99 4.0313
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_78165T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 248 8.2e-65 0.9387755102040817

CDD Domains      help

PSURA_78165T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.77e-134 3 203 4 204
3.77e-134 3 203 4 204
3.77e-134 3 203 4 204
1.42e-125 16 187 1 172
5.18e-114 16 187 1 172

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.69e-11 82 197 43 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PSURA_78165T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000195 0.999797 CS pos: 22-23. Pr: 0.9672

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_78165T0-p1.