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CAZyme Information: PSURA_78164T0-p1

You are here: Home > Sequence: PSURA_78164T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_78164T0-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
305 31845.63 4.1225
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_78164T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 14 262 5.4e-62 0.9428571428571428

CDD Domains      help

PSURA_78164T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.17e-126 1 199 1 199
1.64e-125 1 199 1 199
3.02e-118 1 201 1 201
3.41e-94 1 202 1 179
5.86e-77 7 213 8 215

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.11e-13 90 195 55 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PSURA_78164T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000996 0.998978 CS pos: 22-23. Pr: 0.4185

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_78164T0-p1.