CAZyme Information: PSURA_77835T0-p1

Basic Information

• Species: Phytophthora ramorum
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
• CAZyme ID: PSURA_77835T0-p1
• CAZy Family: GH3
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
778		84354.94	5.7394

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PramorumPr-102	15743	N/A	251	15492

• Gene Location: location=PramPr-102_SC0027:54377-56780(+)

Full Sequence      

MTRLAILMLVVCAAFTALADANGASTDQHVQTRVEEIMSSMDLAAMLGQMTQLDVSTILH
PNRTLNRAVVHEHAKLNVGSYLNTPGAELNDSNANSTHNFSPREWRELITEIQDIFASHG
SQPIIYGLDSVHGANYVRGAVLFGQQLNGGATFNPDLVYNMGRITARDTAAAGIPWLFAP
ILEISQNPLWARTFETFGEHPHLVSVMADAIVRGIQNNGTTAACMKHIIGYSKTTTGQDR
VGVTVSDFQLLNHFAPPFMAAIAAGAMAAMESYISINGVPVVANTKILRDLVRHDMGFQG
LIVTDYAEIHNLHVWHRVAKTDQDAVRMALTNAPLDMSMVPYNTSFIKMARQTVQENPAL
LGRVKDSVRRILTTKTMLGLYENPLPGTDNDIALVGQNESRRAALELARESIVLLKNEDG
LLPLSAESDVFLTGHSADNVGLLCGGWSLRWQGVSGNNLFPNGISLRQGIANVLSTSSGT
LYYANGLHPNGSYSPADLEEIKHRAERSSYTIVAIGEAEYAEKPGDLDDLSLPWGQVEYV
QQIAATGTKVILVLAQGRPRLLQGLADVVHAVVYAMLPGELGGQALAEIIFGHVNPSGRL
PLTYPKTPATIGIPYNHAVDTRCRDERPCAMEWNFGHGLSFTSFEYGNVSLSKTTIPNGN
DASLGVTVEVTNAGSVAGKETVMLFLIQPFRTISVPEVKQLKKFTKVHLQPGETQVVSFT
LTPQDWGVFDPQIGSGFRRIVEAGDYVVALKPETECDVYDESGPISSALCAPFTILEG

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	122	340	3.9e-58	0.9583333333333334

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	1.11e-104	1	748	1	748	beta-glucosidase BglX.
224389	BglX	2.44e-57	100	450	38	374	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
178629	PLN03080	4.43e-51	137	750	108	768	Probable beta-xylosidase; Provisional
396478	Glyco_hydro_3_C	2.09e-46	412	640	1	215	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
395747	Glyco_hydro_3	4.41e-44	47	373	6	315	Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ27116.1|GH3	0.0	50	775	1	724
UIZ29009.1|GH3	3.23e-291	27	775	23	762
CCA27737.1|GH3	1.56e-290	32	775	66	808
UIZ29613.1|GH3	5.69e-269	13	775	53	819
UIZ29432.1|GH3	7.60e-263	13	775	8	763

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	1.76e-125	26	748	9	737	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
5M6G_A	2.71e-84	30	607	47	590	Crystal structure Glucan 1,4-beta-glucosidase from Saccharopolyspora erythraea [Saccharopolyspora erythraea D]
6R5I_A	1.00e-81	123	748	73	716	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	5.16e-81	123	748	73	716	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	5.27e-81	123	748	74	717	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	2.83e-151	32	748	78	809	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	1.31e-124	26	748	31	759	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|T2KMH0|PLH24_FORAG	2.17e-80	120	757	64	713	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
sp|Q56078|BGLX_SALTY	1.32e-79	106	721	86	725	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|P33363|BGLX_ECOLI	2.54e-79	123	721	105	725	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000186	0.999771	CS pos: 19-20. Pr: 0.9703

TMHMM  Annotations     

There is no transmembrane helices in PSURA_77835T0-p1.