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CAZyme Information: PSURA_77293T0-p1

You are here: Home > Sequence: PSURA_77293T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_77293T0-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
302 31975.93 4.3242
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_77293T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 9 253 3.8e-71 0.9469387755102041

CDD Domains      help

PSURA_77293T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.33e-130 1 302 1 295
7.39e-129 1 203 1 203
2.05e-127 1 298 1 291
1.40e-114 26 302 59 327
2.59e-108 38 302 1 258

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.06e-22 20 186 1 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PSURA_77293T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000228 0.999747 CS pos: 19-20. Pr: 0.9805

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_77293T0-p1.