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CAZyme Information: PSURA_77290T0-p1

You are here: Home > Sequence: PSURA_77290T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_77290T0-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
309 PramPr-102_SC0023|CGC1 32647.55 4.4849
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_77290T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 258 6.9e-66 0.926530612244898

CDD Domains      help

PSURA_77290T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.27e-133 5 203 3 202
9.06e-132 5 205 3 204
5.21e-131 5 205 3 204
7.39e-131 5 206 3 204
1.05e-130 5 205 3 204

PDB Hits      help

PSURA_77290T0-p1 has no PDB hit.

Swiss-Prot Hits      help

PSURA_77290T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000368 0.999596 CS pos: 21-22. Pr: 0.9761

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_77290T0-p1.