logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PSURA_75781T0-p1

You are here: Home > Sequence: PSURA_75781T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_75781T0-p1
CAZy Family GH16
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
235 24578.90 3.8263
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.-:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 13 195 8e-38 0.8775510204081632

CDD Domains      help

PSURA_75781T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.71e-21 2 167 1 184
5.14e-21 2 167 1 184
5.72e-21 2 167 1 184
5.72e-21 2 167 1 184
7.14e-21 2 167 1 184

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.17e-15 58 160 56 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PSURA_75781T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000367 0.999605 CS pos: 19-20. Pr: 0.9757

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_75781T0-p1.