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CAZyme Information: PSURA_75231T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_75231T0-p1 | |||||||||||
| CAZy Family | GH16 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 123 | 317 | 4.4e-80 | 0.9946524064171123 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 2.38e-27 | 122 | 318 | 2 | 189 | Amb_all domain. |
| 226384 | PelB | 1.10e-08 | 97 | 400 | 51 | 345 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.56e-261 | 1 | 400 | 1 | 400 | |
| 1.14e-257 | 1 | 400 | 1 | 400 | |
| 2.10e-216 | 1 | 400 | 1 | 400 | |
| 3.11e-200 | 42 | 400 | 133 | 491 | |
| 1.99e-172 | 13 | 334 | 13 | 333 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.81e-83 | 24 | 356 | 4 | 320 | Pectin Lyase B [Aspergillus niger] |
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| 1.01e-79 | 25 | 358 | 5 | 321 | Pectin Lyase A [Aspergillus niger] |
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| 1.78e-77 | 25 | 358 | 5 | 321 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.13e-89 | 1 | 359 | 1 | 342 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
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| 1.50e-88 | 13 | 362 | 12 | 344 | Probable pectin lyase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelB PE=3 SV=2 |
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| 1.69e-87 | 4 | 356 | 3 | 338 | Probable pectin lyase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelD PE=3 SV=1 |
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| 1.69e-87 | 4 | 356 | 3 | 338 | Pectin lyase 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pel2 PE=1 SV=1 |
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| 2.62e-87 | 25 | 384 | 23 | 373 | Probable pectin lyase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pelB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000189 | 0.999807 | CS pos: 21-22. Pr: 0.9448 |