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CAZyme Information: PSURA_72130T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_72130T0-p1 | |||||||||||
| CAZy Family | AA6 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 72 | 349 | 1e-57 | 0.8430769230769231 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 3.75e-69 | 74 | 349 | 1 | 279 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215120 | PLN02188 | 7.15e-25 | 124 | 362 | 122 | 363 | polygalacturonase/glycoside hydrolase family protein |
| 215540 | PLN03010 | 1.35e-24 | 126 | 356 | 141 | 357 | polygalacturonase |
| 215426 | PLN02793 | 4.25e-24 | 124 | 347 | 143 | 368 | Probable polygalacturonase |
| 227721 | Pgu1 | 1.32e-22 | 124 | 308 | 199 | 398 | Polygalacturonase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.63e-171 | 1 | 367 | 1 | 391 | |
| 1.19e-165 | 1 | 357 | 1 | 361 | |
| 3.35e-162 | 1 | 367 | 1 | 391 | |
| 7.10e-159 | 1 | 367 | 1 | 390 | |
| 1.23e-146 | 59 | 367 | 38 | 366 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.34e-59 | 59 | 351 | 11 | 308 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.00e-59 | 59 | 351 | 3 | 300 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 7.39e-59 | 59 | 351 | 11 | 308 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.90e-57 | 59 | 346 | 4 | 294 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 2.55e-53 | 59 | 351 | 3 | 300 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.80e-57 | 57 | 348 | 28 | 321 | Polygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGN1 PE=3 SV=1 |
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| 1.95e-57 | 59 | 346 | 34 | 322 | Endopolygalacturonase B OS=Aspergillus flavus (strain ATCC MYA-384 / AF70) OX=1392242 GN=pgaB PE=2 SV=2 |
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| 1.95e-57 | 59 | 346 | 34 | 322 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
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| 1.95e-57 | 59 | 346 | 34 | 322 | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaI PE=3 SV=1 |
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| 2.00e-57 | 59 | 346 | 35 | 323 | Probable endopolygalacturonase I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaI PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000249 | 0.999719 | CS pos: 20-21. Pr: 0.9742 |