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CAZyme Information: PSURA_71818T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_71818T0-p1 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 49 | 325 | 7.7e-69 | 0.9201388888888888 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 178372 | PLN02773 | 1.38e-46 | 34 | 342 | 1 | 305 | pectinesterase |
| 178113 | PLN02497 | 1.78e-40 | 162 | 326 | 142 | 309 | probable pectinesterase |
| 178098 | PLN02480 | 3.26e-39 | 40 | 323 | 50 | 319 | Probable pectinesterase |
| 395871 | Pectinesterase | 6.25e-39 | 40 | 321 | 2 | 276 | Pectinesterase. |
| 215357 | PLN02665 | 1.19e-38 | 146 | 323 | 160 | 340 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.72e-212 | 1 | 348 | 1 | 348 | |
| 1.12e-201 | 1 | 348 | 1 | 348 | |
| 3.60e-200 | 1 | 348 | 1 | 347 | |
| 3.52e-172 | 1 | 348 | 1 | 346 | |
| 4.57e-170 | 1 | 348 | 1 | 344 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.54e-60 | 32 | 347 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
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| 2.17e-60 | 32 | 347 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
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| 5.95e-33 | 40 | 321 | 9 | 283 | Pectin methylesterase from Carrot [Daucus carota] |
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| 1.12e-31 | 50 | 321 | 13 | 279 | Chain A, Pectinesterase 1 [Solanum lycopersicum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.42e-73 | 32 | 347 | 20 | 330 | Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1 |
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| 6.82e-73 | 32 | 348 | 20 | 330 | Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1 |
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| 6.80e-65 | 32 | 347 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1 |
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| 6.80e-65 | 32 | 347 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1 |
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| 8.41e-63 | 1 | 347 | 1 | 324 | Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000217 | 0.999766 | CS pos: 21-22. Pr: 0.7731 |