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CAZyme Information: PSURA_41921T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_41921T0-p1 | |||||||||||
| CAZy Family | AA17 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 2 | 125 | 8.7e-20 | 0.3630769230769231 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 4.61e-15 | 3 | 125 | 196 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 1.16e-08 | 4 | 94 | 303 | 391 | polygalacturonase ADPG |
| 215426 | PLN02793 | 2.99e-07 | 4 | 85 | 288 | 368 | Probable polygalacturonase |
| 215540 | PLN03010 | 6.30e-07 | 4 | 99 | 268 | 362 | polygalacturonase |
| 215120 | PLN02188 | 6.94e-04 | 4 | 88 | 266 | 351 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.36e-68 | 2 | 125 | 143 | 266 | |
| 8.02e-67 | 2 | 125 | 34 | 157 | |
| 2.19e-66 | 2 | 125 | 239 | 362 | |
| 8.75e-66 | 2 | 125 | 239 | 362 | |
| 2.03e-65 | 2 | 125 | 4 | 127 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.10e-17 | 2 | 125 | 218 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.91e-17 | 2 | 125 | 218 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.63e-16 | 2 | 125 | 210 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
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| 5.01e-16 | 2 | 125 | 210 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.26e-14 | 2 | 121 | 211 | 333 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.72e-16 | 2 | 125 | 242 | 368 | Probable endopolygalacturonase I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaI PE=3 SV=1 |
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| 1.60e-15 | 2 | 125 | 242 | 368 | Endopolygalacturonase I OS=Aspergillus niger OX=5061 GN=pgaI PE=1 SV=1 |
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| 1.60e-15 | 2 | 125 | 242 | 368 | Probable endopolygalacturonase I OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaI PE=3 SV=1 |
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| 2.96e-15 | 2 | 125 | 237 | 363 | Probable endopolygalacturonase A OS=Aspergillus parasiticus OX=5067 GN=pgaA PE=2 SV=1 |
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| 3.02e-15 | 2 | 125 | 241 | 367 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000073 | 0.000001 |