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CAZyme Information: PSURA_39775T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_39775T0-p1 | |||||||||||
| CAZy Family | AA1 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 116 | 310 | 5.5e-81 | 0.9946524064171123 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 3.28e-27 | 115 | 311 | 2 | 189 | Amb_all domain. |
| 226384 | PelB | 6.95e-09 | 90 | 315 | 51 | 280 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.99e-236 | 1 | 344 | 8 | 351 | |
| 2.34e-233 | 1 | 344 | 8 | 351 | |
| 3.86e-195 | 1 | 344 | 8 | 351 | |
| 4.21e-183 | 35 | 344 | 133 | 442 | |
| 4.94e-175 | 6 | 327 | 13 | 333 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.48e-81 | 17 | 343 | 4 | 314 | Pectin Lyase B [Aspergillus niger] |
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| 3.33e-80 | 18 | 343 | 5 | 313 | Pectin Lyase A [Aspergillus niger] |
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| 1.49e-78 | 18 | 343 | 5 | 313 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.21e-88 | 18 | 343 | 24 | 333 | Probable pectin lyase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelA PE=3 SV=1 |
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| 3.36e-87 | 18 | 343 | 24 | 333 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
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| 1.19e-86 | 6 | 343 | 12 | 332 | Probable pectin lyase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelB PE=3 SV=2 |
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| 3.69e-86 | 18 | 343 | 24 | 332 | Probable pectin lyase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelA PE=3 SV=1 |
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| 3.91e-86 | 9 | 343 | 18 | 336 | Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000274 | 0.999684 | CS pos: 14-15. Pr: 0.9535 |