CAZyme Information: PPTG_24618-t26_1-p1

Basic Information

• Species: Phytophthora parasitica
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
• CAZyme ID: PPTG_24618-t26_1-p1
• CAZy Family: PL3
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
950		103056.63	4.4836

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PparasiticaINRA-310	23240	761204	119	23121

• Gene Location: location=KI669691:64272-70787(-)

Full Sequence      

MRASRHEKATTPAAPADAAHDIDFGHLWRQLKAARWTSKRPTGIQTEWTYASPIDDVLVG
ERAVVEFAFKTSLLVDGEDVSVEAGADDADKRDGHGDTDDAAEHDGHGEGGTDDATIRPS
QIDTSVLLLQNTVEQVVGSDSDASGVELSQNAVAKVLDLSQRDLHAEEGLCDAAASLHLL
SEPSGDEKATSSSKSIMLHKWLLGICSTAVALVSISANDLNARANAIVENFTDKQIIGQL
AQVAISSVLNADYSLNEDLVRYYAKLHVGSFLISPFANGPNDLTGVVGWGLTDWRDIITR
IQEIVMEENDGIPMIYGLDSVHGAGFVLNTTLFGAQINSGASFNPELVYEMGRITAQDTL
AAGVPWVFGPILEISSNPLWPRTYETFGEDTHLVSVMGSALIRGLQSNNQTAACMKHFIG
YSKTPSGHDKDGIQISDFDLLNYYVDPFKTAIDAGVMTTMQTYISINGVPSISNHKILQK
LLREDLAFEGLAVTDFGVIGELNSFHRVARTVGEAVRITKLFLDESPEYVDRLKESAKRI
IKTKLQLGLFDTPVPGADDVAKVRNDADVEKSLEMARESIVLLQNNDSTLPISSSSSVFL
TGHSAHNIGNQCGGWSVRWHGYTGNDYFPNGVSVRDGMVDIAGDKVVYFNGLDYDGNYTA
ANLSTAKVHASQAEYTVVIIGEQPYAEKTGDIDDLALPAGQIEYVNELASVSTKVILVLF
AGRPRLLSDLPENVHAVVHGLLACEQGGKAVAEILYGQVSPSGRMPITYPKGSGNILMPY
NHRVSTLCADSTYCEMQWDFGTGLSYTEFIYSDLTLSRAIVTSSSDSIDVSLTVMNSGSM
AGKETVMLFLTQPYRSLSVPEVKQLKKFTKISLEPGQTQRVSFTLTAEDWSVYYPQIGNG
MKKVAEDTDYVIGIKPETDCDVYNETATANPLCATFTLQTGDYPYGVFVE

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	308	511	1.2e-57	0.9305555555555556

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	4.49e-102	295	906	86	742	beta-glucosidase BglX.
224389	BglX	2.07e-57	311	618	59	374	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747	Glyco_hydro_3	1.68e-45	237	538	6	297	Glycosyl hydrolase family 3 N terminal domain.
178629	PLN03080	2.03e-43	319	885	89	742	Probable beta-xylosidase; Provisional
396478	Glyco_hydro_3_C	1.75e-36	580	806	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	3.96e-283	197	939	1	763
UIZ27116.1|GH3	4.80e-271	240	939	1	725
UIZ29613.1|GH3	2.80e-267	176	944	23	825
UIZ29432.1|GH3	3.30e-267	197	944	1	769
CCA27737.1|GH3	3.83e-266	188	939	31	809

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	1.25e-108	229	889	22	718	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
6R5I_A	7.93e-76	295	897	55	705	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	3.90e-75	295	897	55	705	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	3.98e-75	295	897	56	706	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5P_A	7.07e-75	295	897	87	737	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	1.12e-125	218	912	71	809	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	8.98e-108	229	889	44	740	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|P33363|BGLX_ECOLI	1.63e-76	295	888	86	728	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|Q56078|BGLX_SALTY	1.10e-75	295	888	86	728	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|T2KMH0|PLH24_FORAG	3.69e-72	297	921	50	713	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000021	0.000007

TMHMM  Annotations     

There is no transmembrane helices in PPTG_24618-t26_1-p1.