You are browsing environment: FUNGIDB
CAZyme Information: PPTG_20263-t26_1-p1
You are here: Home > Sequence: PPTG_20263-t26_1-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora parasitica | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica | |||||||||||
| CAZyme ID | PPTG_20263-t26_1-p1 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 123 | 296 | 1.9e-34 | 0.5507692307692308 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.98e-39 | 125 | 296 | 1 | 178 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 4.06e-09 | 136 | 295 | 151 | 338 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215540 | PLN03010 | 4.54e-08 | 177 | 296 | 141 | 248 | polygalacturonase |
| 178580 | PLN03003 | 6.04e-08 | 177 | 288 | 115 | 220 | Probable polygalacturonase At3g15720 |
| 215426 | PLN02793 | 1.48e-07 | 175 | 297 | 143 | 268 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.96e-130 | 1 | 297 | 1 | 292 | |
| 2.46e-110 | 1 | 297 | 1 | 310 | |
| 2.80e-109 | 1 | 297 | 1 | 310 | |
| 1.13e-108 | 1 | 297 | 1 | 310 | |
| 4.45e-101 | 94 | 297 | 22 | 224 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.29e-35 | 123 | 296 | 20 | 198 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
|
| 5.43e-35 | 107 | 296 | 8 | 201 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 5.43e-35 | 107 | 296 | 8 | 201 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
|
| 9.04e-35 | 110 | 296 | 3 | 193 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 1.20e-33 | 120 | 296 | 13 | 206 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.06e-41 | 125 | 296 | 57 | 236 | Polygalacturonase OS=Penicillium expansum OX=27334 GN=PEPG1 PE=3 SV=1 |
|
| 6.80e-38 | 123 | 296 | 62 | 240 | Endo-polygalacturonase OS=Sclerotinia sclerotiorum OX=5180 GN=PG1 PE=3 SV=1 |
|
| 1.79e-37 | 102 | 296 | 19 | 218 | Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PGU1 PE=1 SV=1 |
|
| 9.77e-36 | 123 | 296 | 59 | 237 | Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaE PE=3 SV=1 |
|
| 1.41e-35 | 104 | 296 | 22 | 217 | Endopolygalacturonase B OS=Aspergillus niger OX=5061 GN=pgaB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000233 | 0.999732 | CS pos: 22-23. Pr: 0.9682 |