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CAZyme Information: PPTG_19765-t26_7-p1

You are here: Home > Sequence: PPTG_19765-t26_7-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_19765-t26_7-p1
CAZy Family PL1
CAZyme Description hypothetical protein, variant 7
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
341 38256.41 9.9408
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_19765-t26_7-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT30 64 261 8.5e-44 0.9661016949152542

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
224436 KdtA 1.86e-63 18 336 1 282
3-deoxy-D-manno-octulosonic-acid transferase [Cell wall/membrane/envelope biogenesis].
235589 PRK05749 6.47e-63 27 326 12 274
3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
398219 Glycos_transf_N 2.15e-53 65 261 2 175
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.56e-51 34 330 7 276
9.54e-50 34 330 7 276
1.91e-49 30 329 2 274
7.20e-49 34 330 7 276
7.20e-49 34 330 7 276

PDB Hits      help

PPTG_19765-t26_7-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.95e-27 87 331 93 316
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=waaA PE=3 SV=1
2.01e-27 87 331 98 321
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=waaA PE=3 SV=1
1.57e-26 85 331 49 274
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=waaA PE=3 SV=1
5.48e-26 33 336 10 293
Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KDTA PE=2 SV=1
6.28e-26 87 331 95 318
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=waaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999952 0.000054

TMHMM  Annotations      download full data without filtering help

Start End
21 38