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CAZyme Information: PPTG_18231-t26_1-p1

You are here: Home > Sequence: PPTG_18231-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_18231-t26_1-p1
CAZy Family GT60
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
684 73525.08 4.9968
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 16 550 2.6e-107 0.9781021897810219

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 5.38e-41 20 552 3 535
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 1.33e-22 21 528 2 508
choline dehydrogenase; Validated
366272 GMC_oxred_N 8.05e-17 107 326 19 215
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
238533 APPLE_Factor_XI_like 1.10e-13 561 630 3 71
Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
405052 PAN_4 6.85e-09 570 614 1 51
PAN domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.96e-241 8 631 8 637
1.21e-167 13 644 8 653
2.68e-155 12 635 11 636
1.64e-147 8 552 4 551
4.43e-140 22 532 19 526

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.73e-45 22 552 5 541
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
4.07e-45 25 552 3 536
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
4.13e-36 24 559 7 551
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
1.14e-35 10 559 215 773
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
1.12e-33 10 552 210 765
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.60e-45 10 552 220 768
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
1.27e-22 21 550 3 533
4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1
5.99e-17 23 552 12 528
Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1
2.81e-16 19 528 40 570
Cyclase atC OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=atC PE=1 SV=1
6.54e-16 22 335 31 351
Dehydrogenase eriK OS=Hericium erinaceus OX=91752 GN=eriK PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000726 0.999228 CS pos: 22-23. Pr: 0.9567

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_18231-t26_1-p1.