CAZyme Information: PPTG_18166-t26_1-p1

Basic Information

• Species: Phytophthora parasitica
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
• CAZyme ID: PPTG_18166-t26_1-p1
• CAZy Family: GT60
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
445	KI669641|CGC1	48625.14	4.6755

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PparasiticaINRA-310	23240	761204	119	23121

• Gene Location: location=KI669641:87189-88608(+)

Full Sequence      

MFAGALSTAIALVVLTSRADAHGYLKQPEPDWKDSPNPGWITMVDNYWDIGSGGDQVGKF
KTMAKEKGMSVKDVVLDMVKDQKCGNTVENGSPKPIPSDGKVKWFGHRGGGFTHVGPCEI
YLDDKMVLHGDDCEEEYPGGSDGSSSGSEMPVDFSSCNGKCTLTIYWLAFQNAQWQTYVN
CVPLSGSSGSTTQTQGSQTSSKTSETSTIQASSAGKDKEKSPAADAPSTEQQSPSTEQKE
TEAPKTDNNDNDAPSSDQKENETPNTNQKENKGSNNEEKKNEAPNTEQKENDSQNTDQKE
NKSPSSDQKDNQPPSSDQQSPQAPSPEQQWTQAPSNNQQPTPAPPSNQQQWTPAPANNQQ
PTSAPANNQQPTQAPSNDQQNNQQQEQQQQQSPSTEQRSSVSFNRAAVFGQLQHAEWRNR
HRATFYESPSVDSASVPRKSQYHRH

Enzyme Prediction     

No EC number prediction in PPTG_18166-t26_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA17	9	258	1.4e-52	0.9510204081632653

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
139494	PRK13335	8.60e-07	261	375	53	166	superantigen-like protein SSL3; Reviewed.
165527	PHA03269	1.78e-06	290	402	20	135	envelope glycoprotein C; Provisional
236304	PRK08581	5.12e-06	187	416	31	276	amidase domain-containing protein.
237863	PRK14949	5.73e-06	209	373	379	541	DNA polymerase III subunits gamma and tau; Provisional
236669	PRK10263	9.29e-06	294	376	752	838	DNA translocase FtsK; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ETN00163.1|AA17	4.05e-182	1	445	1	445
ETM32479.1|AA17	1.29e-166	1	243	1	243
ETP30231.1|AA17	1.45e-166	1	243	1	243
ETO60944.1|AA17	1.45e-166	1	243	1	243
ETI32208.1|AA17	1.22e-165	1	243	1	243

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Z5Y_A	4.33e-32	22	188	1	174	Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits     

PPTG_18166-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000264	0.999728	CS pos: 21-22. Pr: 0.9756

TMHMM  Annotations     

There is no transmembrane helices in PPTG_18166-t26_1-p1.