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CAZyme Information: PPTG_18125-t26_1-p1

You are here: Home > Sequence: PPTG_18125-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_18125-t26_1-p1
CAZy Family GT59
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
441 46592.43 4.7594
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_18125-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH6 39 292 6.3e-58 0.935374149659864

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396075 Glyco_hydro_6 1.05e-45 43 292 2 287
Glycosyl hydrolases family 6.
227616 CelA1 1.06e-14 72 302 170 399
Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.02e-161 6 344 5 335
6.54e-85 25 316 21 320
1.05e-84 23 327 21 327
2.04e-84 8 320 9 328
7.84e-78 8 326 3 309

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.38e-28 58 309 44 314
GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_A GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102]
7.13e-26 44 301 31 280
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with cellobiose at 1.75 angstrom [Mycobacterium tuberculosis H37Rv]
7.13e-26 44 301 31 280
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with METHYL-CELLOBIOSYL-4-DEOXY-4-THIO-BETA-D-CELLOBIOSIDE at 1.6 angstrom [Mycobacterium tuberculosis H37Rv]
1.05e-25 44 301 52 301
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with thiocellopentaose at 1.1 angstrom [Mycobacterium tuberculosis H37Rv]
1.58e-25 59 301 40 274
CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE [Thermobifida fusca],2BOD_X Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside [Thermobifida fusca]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.25e-24 59 301 71 305
Endoglucanase E-2 OS=Thermobifida fusca OX=2021 GN=celB PE=1 SV=2
1.12e-23 60 290 75 301
Endoglucanase A OS=Thermobispora bispora OX=2006 GN=celA PE=3 SV=1
9.91e-23 83 312 77 340
Endoglucanase-6B OS=Humicola insolens OX=34413 GN=cel6B PE=1 SV=1
1.79e-21 89 304 238 438
Endoglucanase A OS=Cellulomonas fimi OX=1708 GN=cenA PE=1 SV=1
1.69e-20 83 302 100 349
Probable exoglucanase GH6D OS=Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) OX=515849 GN=GH6D PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.154571 0.845402 CS pos: 24-25. Pr: 0.7389

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_18125-t26_1-p1.