CAZyme Information: PPTG_18120-t26_1-p1

Basic Information

• Species: Phytophthora parasitica
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
• CAZyme ID: PPTG_18120-t26_1-p1
• CAZy Family: GT59
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
499		54051.43	4.4225

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PparasiticaINRA-310	23240	761204	119	23121

• Gene Location: location=KI669638:169280-170779(-)

Full Sequence      

MLTIRSLAASALACALLSVNPSQVAADYTVKADAATTVQGTWDGWGTSLCWWANVFGDRA
DIADALFTLNETVTVEGAGDIPGLGFNIARYNIGGSSSNVVDDSGTEVAMKTSENMPAFK
FMESFWLDWMSKDPASTSWNWKADAKQRAMLTLANQRGANQLEAFSNSPPWWMTNNRATA
GGDNGKKDNLQDWNHDEFVLYLATVVSKAKSDWGIKFTFVEPFNEPSETWWEFPGKQEGC
HFSVDTQQTILPLLRKQLDALELQDVAIATSDENSATEALHTLESMSSNADVMGSFEKVN
THGYQGLEAYRGPDRGGLKDLTNKLTKSLWDSEYGEKDATGLTMAESIGLDINEMGVAGF
VYWQALDSGGWGLIQSNPGDKWIGTPNPKYYVMAQYSRHIRSGMQILASDDAKTVLGYDS
AKKLLVVVTVNMGDAQTVTFDLASFAAVAGPINAWTTETSGKGALYKASTVKPSGKSFSA
AFPAGSVMTFEIEGVTLAA

Enzyme Prediction     

EC	3.2.1.164:3

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH30	37	490	6.4e-134	0.9846491228070176

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
405300	Glyco_hydr_30_2	6.53e-17	29	239	3	195	O-Glycosyl hydrolase family 30.
227807	XynC	2.62e-07	135	490	89	426	O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ26121.1|GH30_5	7.80e-229	3	493	4	497
ATB44315.1|GH30_5	3.10e-164	15	496	21	498
QRN98147.1|GH30_5	3.89e-160	9	496	16	499
ADO68177.1|GH30_5	4.45e-159	9	496	16	499
EAU67098.1|GH30_5	4.45e-159	9	496	16	499

PDB Hits     

PPTG_18120-t26_1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q76FP5|6GAL_HYPRU	1.39e-128	5	497	2	478	Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
sp|A0A401ETL2|EXGAL_BIFL2	1.25e-16	5	367	6	445	Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.001038	0.998925	CS pos: 26-27. Pr: 0.9085

TMHMM  Annotations     

There is no transmembrane helices in PPTG_18120-t26_1-p1.