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CAZyme Information: PPTG_17240-t26_1-p1

You are here: Home > Sequence: PPTG_17240-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_17240-t26_1-p1
CAZy Family GT41
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
274 30076.67 8.5893
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_17240-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 2 222 1.1e-68 0.7029702970297029

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395262 Glyco_hydro_10 2.06e-82 2 234 83 310
Glycosyl hydrolase family 10.
214750 Glyco_10 2.47e-73 2 216 40 256
Glycosyl hydrolase family 10.
226217 XynA 4.61e-53 2 216 106 330
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.31e-200 2 274 114 386
5.27e-114 2 249 115 363
2.09e-90 2 236 119 353
2.48e-87 2 236 123 357
1.68e-81 2 236 120 352

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.31e-57 3 233 90 330
Chain A, Beta-xylanase [Bispora sp. MEY-1],5XZO_B Chain B, Beta-xylanase [Bispora sp. MEY-1],5XZU_A Chain A, Beta-xylanase [Bispora sp. MEY-1],5XZU_B Chain B, Beta-xylanase [Bispora sp. MEY-1]
2.46e-52 2 237 87 318
Crystal structure of GH10 family xylanase XynAF1 from Aspergillus fumigatus Z5 [Aspergillus fumigatus Z5],6JDT_B Crystal structure of GH10 family xylanase XynAF1 from Aspergillus fumigatus Z5 [Aspergillus fumigatus Z5],6JDY_A Ligand complex structure of GH10 family xylanase XynAF1, soaking for 120 minutes [Aspergillus fumigatus Z5],6JDY_B Ligand complex structure of GH10 family xylanase XynAF1, soaking for 120 minutes [Aspergillus fumigatus Z5],6JDZ_A Ligand complex structure of GH10 family xylanase XynAF1, soaking for 20 minutes [Aspergillus fumigatus Z5],6JDZ_B Ligand complex structure of GH10 family xylanase XynAF1, soaking for 20 minutes [Aspergillus fumigatus Z5],6JE0_A Ligand complex structure of GH10 family xylanase XynAF1, soaking for 30 minutes [Aspergillus fumigatus Z5],6JE0_B Ligand complex structure of GH10 family xylanase XynAF1, soaking for 30 minutes [Aspergillus fumigatus Z5],6JE1_A Ligand complex structure of GH10 family xylanase XynAF1, soaking for 40 minutes [Aspergillus fumigatus Z5],6JE1_B Ligand complex structure of GH10 family xylanase XynAF1, soaking for 40 minutes [Aspergillus fumigatus Z5],6JE2_A Ligand complex structure of GH10 family xylanase XynAF1, soaking for 80 minutes [Aspergillus fumigatus Z5],6JE2_B Ligand complex structure of GH10 family xylanase XynAF1, soaking for 80 minutes [Aspergillus fumigatus Z5]
1.93e-50 2 234 85 300
Crystal Structure of the catalytic domain of xylanase A from Streptomyces halstedii JM8 [Streptomyces halstedii]
1.64e-46 15 233 104 324
Penicillium canescens endo-1,4-beta-xylanase XylE [Penicillium canescens]
4.47e-45 2 235 122 338
CRYSTAL STRUCTURE of endo-1,4-beta-xylanase from Cellulomonas flavigena [Cellulomonas flavigena],5M0K_B CRYSTAL STRUCTURE of endo-1,4-beta-xylanase from Cellulomonas flavigena [Cellulomonas flavigena]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.07e-47 2 224 110 320
Endo-1,4-beta-xylanase F3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF3 PE=1 SV=1
2.82e-46 2 242 104 340
Endo-1,4-beta-xylanase D OS=Talaromyces funiculosus OX=28572 GN=xynD PE=1 SV=1
2.89e-46 2 236 103 331
Endo-1,4-beta-xylanase OS=Agaricus bisporus OX=5341 GN=xlnA PE=2 SV=1
4.82e-46 2 224 113 323
Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus OX=33178 GN=xlnC PE=2 SV=1
4.82e-46 2 224 113 323
Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnC PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999949 0.000094

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_17240-t26_1-p1.