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CAZyme Information: PPTG_16010-t26_1-p1

You are here: Home > Sequence: PPTG_16010-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_16010-t26_1-p1
CAZy Family GT30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
209 22274.30 9.3679
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.164:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 4 202 6.8e-47 0.4692982456140351

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 2.40e-04 4 202 230 426
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.10e-81 1 205 288 497
2.64e-47 4 207 292 497
3.07e-42 9 207 294 495
4.55e-42 4 207 293 498
4.55e-42 4 207 293 498

PDB Hits      help

PPTG_16010-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.30e-40 11 209 278 478
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000032 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_16010-t26_1-p1.