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CAZyme Information: PPTG_15283-t26_1-p1

You are here: Home > Sequence: PPTG_15283-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_15283-t26_1-p1
CAZy Family GT1|GT1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
511 KI669606|CGC1 56095.89 4.4681
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.164:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 38 504 9.2e-108 0.9824561403508771

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
405300 Glyco_hydr_30_2 6.99e-14 64 275 39 220
O-Glycosyl hydrolase family 30.
227807 XynC 3.38e-08 168 504 117 426
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.81e-143 12 506 13 496
3.64e-111 18 506 29 494
3.75e-111 42 506 48 495
3.75e-111 42 506 48 495
3.72e-110 32 507 32 493

PDB Hits      help

PPTG_15283-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.51e-89 3 506 2 473
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
1.66e-08 43 266 50 295
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000389 0.999589 CS pos: 21-22. Pr: 0.9399

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_15283-t26_1-p1.