CAZyme Information: PPTG_14859-t26_1-p1

Basic Information

• Species: Phytophthora parasitica
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
• CAZyme ID: PPTG_14859-t26_1-p1
• CAZy Family: GT1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
517	KI669601|CGC1	56892.25	5.6734

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PparasiticaINRA-310	23240	761204	119	23121

• Gene Location: location=KI669601:561680-563233(+)

Full Sequence      

MVCLSTPHFRFHRVLDRERMLAIRSLTASALACALLATQFPSVVADYTVKADVSTTLLEK
WEGWGTSLCWWANAFGDREDIADVFFTRKESVKLEGATTTLPALSFNIARYNIGGSSKNV
IDDGGTEIAMKQSENMPPFKFIESFWLNWASNDSTSKSWNWDADLKQRTMLDLAIKRGVD
ITEAFSNAPPWWMTHNHATAGGDDGKKDNLQSWNHDAFALYLATVVKQARESWGVNFTYI
EPFNEPMSTWWTYPGKQEGCHFEVKTQNDVLLQLRGYLDKFGLKDVIIATSDENTPSIAL
STLTAMSENPDVMATFGKVNTHGYEGLSPYRGKDRGPLKSLVTKSKKTLWDSEYGEKDGT
GLGMAESIALDINQMGVSAFVYWQALDGGGWGLIQSSPGNMTINTPNTKYYALAHYSRHI
RPGMAILSTDDVNTVMAYDATSKLLILATVNTGDAASKVKYDLASFKTVAGPVSAWTTET
SGKGALYKPSKVELTGTSFSVSIPAASVMTFEVEGVA

Enzyme Prediction     

EC	3.2.1.164:3

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH30	58	511	2.5e-134	0.9802631578947368

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
405300	Glyco_hydr_30_2	5.64e-14	64	259	18	195	O-Glycosyl hydrolase family 30.
227807	XynC	1.90e-11	189	511	125	426	O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ26121.1|GH30_5	4.80e-270	23	514	5	497
ATB44315.1|GH30_5	2.64e-157	45	515	32	496
ADO68177.1|GH30_5	9.29e-153	15	516	3	498
EAU67098.1|GH30_5	9.29e-153	15	516	3	498
QRN98147.1|GH30_5	1.50e-151	45	516	33	498

PDB Hits     

PPTG_14859-t26_1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q76FP5|6GAL_HYPRU	1.12e-129	23	516	1	476	Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
sp|A0A401ETL2|EXGAL_BIFL2	2.48e-16	47	387	30	445	Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.050549	0.949440	CS pos: 45-46. Pr: 0.8072

TMHMM  Annotations     

There is no transmembrane helices in PPTG_14859-t26_1-p1.