dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: PPTG_14175-t26_1-p1

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Basic Information help

Species

Phytophthora parasitica

Lineage

Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica

CAZyme ID

PPTG_14175-t26_1-p1

CAZy Family

GH81

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
383		40429.11	4.2742

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PparasiticaINRA-310	23240	761204	119	23121

Gene Location

Full Sequence Download help

Enzyme Prediction help

EC	3.2.1.14:41	3.2.1.-:2	3.2.1.17:2	3.2.1.132:1

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH18	125	293	6.7e-19	0.4358108108108108

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
119349	GH18_chitinase-like	1.16e-20	128	292	21	180	The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model.
214753	Glyco_18	3.34e-16	125	288	20	184	Glyco_18 domain.
119365	GH18_chitinase	7.27e-16	128	288	23	209	The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
395573	Glyco_hydro_18	2.72e-14	128	289	20	176	Glycosyl hydrolases family 18.
119358	GH18_plant_chitinase_class_V	2.69e-09	132	288	27	189	The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
4.84e-11	125	352	42	278
2.06e-10	129	352	46	278
2.11e-10	131	352	65	296
2.25e-10	129	352	78	310
8.93e-10	102	289	20	241

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
2.93e-09	129	289	40	218	Crystal structure of Aspergillus niger chitinase B [Aspergillus niger]
4.03e-09	125	289	58	240	Structure of Chitinase 42 from Trichoderma harzianum [Trichoderma harzianum]
6.85e-09	160	289	91	223	The crystal structure of a chitinase CrChi1 from the nematophagous fungus Clonostachys rosea [Clonostachys rosea],3G6M_A crystal structure of a chitinase CrChi1 from the nematophagous fungus Clonostachys rosea in complex with a potent inhibitor caffeine [Clonostachys rosea]
1.56e-08	129	289	27	205	Chain A, CHITINASE 1 [Coccidioides immitis],1LL4_A Chain A, Chitinase 1 [Coccidioides immitis],1LL4_B Chain B, Chitinase 1 [Coccidioides immitis],1LL4_C Chain C, Chitinase 1 [Coccidioides immitis],1LL4_D Chain D, Chitinase 1 [Coccidioides immitis]
3.67e-08	129	289	27	205	Chain A, CHITINASE 1 [Coccidioides immitis],1LL7_B Chain B, CHITINASE 1 [Coccidioides immitis]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
3.75e-10	160	289	109	241	Endochitinase 1 OS=Metarhizium anisopliae OX=5530 GN=chit1 PE=1 SV=1
1.19e-09	160	289	109	241	Endochitinase 1 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) OX=655844 GN=chit1 PE=3 SV=1
5.04e-09	102	289	20	241	Endochitinase 46 OS=Trichoderma harzianum OX=5544 GN=chit46 PE=1 SV=1
4.88e-08	131	289	64	240	Chitinase 1 OS=Aphanocladium album OX=12942 GN=CHI1 PE=1 SV=2
8.70e-08	129	289	62	240	Endochitinase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) OX=443226 GN=CTS1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999837	0.000210

TMHMM Annotations download full data without filtering help

Start	End
51	73