CAZyme Information: PPTG_14130-t26_1-p1

Basic Information

• Species: Phytophthora parasitica
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
• CAZyme ID: PPTG_14130-t26_1-p1
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
538		61091.39	5.5388

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PparasiticaINRA-310	23240	761204	119	23121

• Gene Location: location=KI669600:363175-364822(-)

Full Sequence      

MGIRLFVSLNEEDPLTSFRLVNPKDGAVDVLPIEFKFLINARSTEEYEDYYADANVCVEL
NGLWTKCKAPGSPQIILRLLPEGNYTAVAYITDKSGEVRYHTAENVTFTVLDSTTFNLYY
GEMAEGSRTEQHFPKDIHLLQWAELLQQEVGDDDDIVLPRSHVSHTSSPMLVIGVKTAVV
TGFPRRQAIRDTWAKPATLPFDVKVLFLGCEPDLTDFKNEHDRRRILQAIAKERVVYRDL
LTEELECTDSYRGLSDKVKSFMHLVTAEFPDTRFIMLADDDIYLKIDQLAENLRLENRPR
LYFGEVWAVRFASKQQPIRDVNSPYYLPSHQYSMRALLPFAVGPHYVVSMEGVRFISKNY
WRLSSMNGLEDVSSGFWLRTMQINALHMPEFSSLRASMVCDDTLLSFADLSPLGIRSIHA
NLVDNRSFCHDFHSVMWHRHVHSIPSLKELLQQPSHEAAEPLEVESFLSNTNSDQVIVIV
STPSNAGIKAQFLPSVDSLDEFVQTICTQVQASPTCTRTLHHYLQHATSAGISTLPTP

Enzyme Prediction     

EC	2.4.1.122:14

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT31	185	387	1.8e-34	0.984375

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
250845	Galactosyl_T	2.00e-17	185	389	2	196	Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2.
215596	PLN03133	9.20e-10	163	386	379	587	beta-1,3-galactosyltransferase; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AHH38393.1|GT31	3.86e-15	155	418	68	318
ADO28988.1|GT31	1.11e-14	170	392	89	305
AAH67324.1|GT31	1.73e-14	171	393	138	347
AUD41251.1|GT31	4.14e-14	165	384	52	256
SVE93770.1|GT31	4.23e-14	186	429	81	303

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6WMM_A	1.12e-08	169	349	109	279	Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases [Homo sapiens],6WMM_B Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases [Homo sapiens]
6WMN_A	1.12e-08	169	349	109	279	Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases [Homo sapiens],6WMN_B Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases [Homo sapiens],6WMN_C Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases [Homo sapiens],6WMN_D Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases [Homo sapiens],6WMO_A Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases [Homo sapiens],6WMO_B Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases [Homo sapiens]
7JHK_A	1.14e-08	169	349	115	285	Chain A, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHK_B Chain B, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHK_C Chain C, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHK_D Chain D, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHL_A Chain A, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHL_B Chain B, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHM_A Chain A, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHM_B Chain B, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHN_A Chain A, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHO_A Chain A, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHO_B Chain B, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens]
7JHI_A	1.21e-08	169	349	129	299	Chain A, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHI_B Chain B, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHI_C Chain C, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens],7JHI_D Chain D, N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [Homo sapiens]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q99NB2|B3GN5_RAT	6.36e-14	170	375	88	286	Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Rattus norvegicus OX=10116 GN=B3gnt5 PE=2 SV=2
sp|Q8BGY6|B3GN5_MOUSE	1.13e-13	170	375	87	285	Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Mus musculus OX=10090 GN=B3gnt5 PE=2 SV=1
sp|Q5HZL5|B3G5A_XENLA	8.59e-13	157	381	75	292	Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A OS=Xenopus laevis OX=8355 GN=b3gnt5-a PE=2 SV=1
sp|Q7JK26|B3GT1_PANTR	1.03e-12	169	392	78	286	Beta-1,3-galactosyltransferase 1 OS=Pan troglodytes OX=9598 GN=B3GALT1 PE=3 SV=1
sp|O54904|B3GT1_MOUSE	1.03e-12	169	392	78	286	Beta-1,3-galactosyltransferase 1 OS=Mus musculus OX=10090 GN=B3galt1 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000048	0.000000

TMHMM  Annotations     

There is no transmembrane helices in PPTG_14130-t26_1-p1.