You are browsing environment: FUNGIDB
CAZyme Information: PPTG_13182-t26_1-p1
You are here: Home > Sequence: PPTG_13182-t26_1-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora parasitica | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica | |||||||||||
| CAZyme ID | PPTG_13182-t26_1-p1 | |||||||||||
| CAZy Family | GH72 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 2.4.1.34:28 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT48 | 861 | 1558 | 5.5e-247 | 0.8917456021650879 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 396784 | Glucan_synthase | 8.06e-168 | 862 | 1553 | 3 | 702 | 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
| 405046 | FKS1_dom1 | 1.55e-30 | 135 | 229 | 6 | 106 | 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. |
| 395036 | Sugar_tr | 6.19e-20 | 1784 | 2219 | 1 | 441 | Sugar (and other) transporter. |
| 273317 | SP | 1.65e-16 | 1783 | 2219 | 25 | 474 | MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids] |
| 340916 | MFS_GLUT6_8_Class3_like | 1.88e-11 | 1967 | 2219 | 155 | 430 | Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 2447 | 1 | 2450 | |
| 0.0 | 42 | 2238 | 96 | 2239 | |
| 0.0 | 47 | 2229 | 47 | 2255 | |
| 0.0 | 11 | 2229 | 16 | 2213 | |
| 0.0 | 9 | 2240 | 6 | 2185 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.01e-203 | 17 | 1773 | 238 | 1915 | Callose synthase 7 OS=Arabidopsis thaliana OX=3702 GN=CALS7 PE=3 SV=3 |
|
| 2.50e-201 | 47 | 1773 | 241 | 1936 | Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3 |
|
| 2.67e-198 | 37 | 1773 | 231 | 1910 | Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1 |
|
| 9.02e-195 | 45 | 1773 | 249 | 1903 | Putative callose synthase 6 OS=Arabidopsis thaliana OX=3702 GN=CALS6 PE=3 SV=2 |
|
| 1.12e-193 | 44 | 1773 | 264 | 1889 | Callose synthase 10 OS=Arabidopsis thaliana OX=3702 GN=CALS10 PE=2 SV=5 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000088 | 0.000001 |
TMHMM Annotations download full data without filtering help
| Start | End |
|---|---|
| 258 | 280 |
| 311 | 333 |
| 346 | 368 |
| 393 | 415 |
| 452 | 474 |
| 489 | 511 |
| 518 | 540 |
| 1304 | 1326 |
| 1359 | 1381 |
| 1391 | 1413 |
| 1451 | 1470 |
| 1509 | 1531 |
| 1624 | 1646 |
| 1661 | 1683 |
| 1696 | 1718 |
| 1733 | 1755 |
| 1776 | 1798 |
| 1841 | 1863 |
| 1870 | 1889 |
| 1893 | 1915 |
| 1928 | 1947 |
| 1967 | 1989 |
| 2040 | 2062 |
| 2082 | 2099 |
| 2111 | 2130 |
| 2135 | 2157 |
| 2170 | 2189 |
| 2194 | 2216 |