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CAZyme Information: PPTG_13027-t26_1-p1

You are here: Home > Sequence: PPTG_13027-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_13027-t26_1-p1
CAZy Family GH72
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
484 KI669591|CGC1 54920.32 7.1871
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_13027-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT60 64 378 4.7e-61 0.9939393939393939

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371506 GlcNAc 1.47e-45 64 378 2 350
Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.66e-272 11 471 16 479
5.55e-251 18 472 4 460
1.52e-201 1 470 7 487
2.50e-151 22 415 30 423
2.58e-39 47 395 42 385

PDB Hits      help

PPTG_13027-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.92e-18 64 308 6 247
[Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase OS=Dictyostelium discoideum OX=44689 GN=gnt1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000235 0.999718 CS pos: 16-17. Pr: 0.9831

TMHMM  Annotations      download full data without filtering help

Start End
441 463