CAZyme Information: PPTG_12466-t26_1-p1

Basic Information

• Species: Phytophthora parasitica
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
• CAZyme ID: PPTG_12466-t26_1-p1
• CAZy Family: GH5|CBM43
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
863		95456.94	6.5461

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PparasiticaINRA-310	23240	761204	119	23121

• Gene Location: location=KI669590:380208-382799(+)

Full Sequence      

MGLDQALAPQVGSNGDEKTARITRELVRTSGFYRQQKEEELWHSPEKTLAGELSVFAASV
QFDRRLTRQIAAPSSQVHPSTGRARLLILAPETTMRHRQYATLATVVVWVVTLAFVTAAK
NDTTAGTTYPTKSGIKIWVDPATPDDRQTYTSSRGRKWDLVMSDEFNTPNRSFRPGDDHI
WTSLEKPDGVNGALELYSHNMTSTKCDDDGTCYFYIKAVDELNVIHVYNMYTHPPGYVDA
YFFYRAAMVQSWNKFCYQGGMIETRVQLPGVVTPESGNPDLAKGKNSKVEATKFYPTWPG
IWMMGNLGRAIFSASTNRMWPFSYDKCEPDLFDPSYQRISACNDNPGYGLNPNQGRGAPE
IDVLEGGATLVSSSLQIGPGMPDEYRIIGVNYSSGDSSSCIYAGTCMSPGANYVDVPTAY
YKKERGHKSWYQGLRYSANNYCQQDADAKQSYSTIAASVKSGITENSCSVDICPASNDVN
GDLSLIDSKGEDHWGINTNGTCFPLFNVYTGAYLCDPDNTFYKCAKPRNESTTPKSNAMS
QFNYQMDAISANWPVHLGAYMDFVTYQLEWVTGKNGYVRWNLMGSPLFEVPSKSIWDIPQ
NSNKTNPTKAMLEEPMYLIFNVALSSSWGATPPNPGKACRGDGSDKVANKICDAFPLYLK
IDYIRLYQDLADDLEEDNYMHVGCDPDTHPTKKWIDAHIDEYEDDDNKHKVVAGKAFCTV
NDDCTIGGSLGKTLLKTGKCVKGRCQCTYSSSWGGPRCTTAVSGSSSTTVASKSVSTNSY
GPPFGMSIGIAAIIVFLSFVSVMWSSMKEKKAAALLKKQGKIAADLSYRGNEAQVKFDAE
RQSHGNGSDPRQRPRDNYSQNFV

Enzyme Prediction     

EC	-	-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH16	164	443	3.2e-60	0.7944785276073619

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
397841	SKN1	1.58e-61	127	704	85	478	Beta-glucan synthesis-associated protein (SKN1). This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1. Beta1,6-Glucan is a key component of the yeast cell wall, interconnecting cell wall proteins, beta1,3-glucan, and chitin. It has been postulated that the synthesis of beta1,6-glucan begins in the endoplasmic reticulum with the formation of protein-bound primer structures and that these primer structures are extended in the Golgi complex by two putative glucosyltransferases that are functionally redundant, Kre6 and Skn1. This is followed by maturation steps at the cell surface and by coupling to other cell wall macromolecules.
185689	GH16_fungal_KRE6_glucanase	2.84e-45	160	668	1	295	Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16. KRE6 is a Saccharomyces cerevisiae glucanase that participates in the synthesis of beta-1,6-glucan, a major structural component of the cell wall. It is a golgi membrane protein required for normal beta-1,6-glucan levels in the cell wall. KRE6 is closely realted to laminarinase, a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.
225182	BglS	5.35e-10	139	328	30	157	Beta-glucanase, GH16 family [Carbohydrate transport and metabolism].
185693	GH16_laminarinase_like	2.89e-07	562	667	159	235	Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.
185693	GH16_laminarinase_like	5.96e-05	163	306	2	103	Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ28152.1|GH16	0.0	119	863	8	739
UIZ28149.1|GH16	0.0	95	863	1	754
UIZ27810.1|GH16	0.0	106	817	42	747
UIZ28151.1|GH16	0.0	125	863	26	752
UIZ28150.1|GH16	0.0	162	813	1	648

PDB Hits     

PPTG_12466-t26_1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P32486|KRE6_YEAST	2.48e-34	129	703	296	688	Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=KRE6 PE=1 SV=2
sp|P33336|SKN1_YEAST	2.29e-33	118	404	334	601	Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SKN1 PE=1 SV=1
sp|P87024|SKN1_CANAX	5.65e-31	129	703	325	715	Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans OX=5476 GN=SKN1 PE=2 SV=1
sp|P87023|KRE6_CANAX	1.77e-30	129	703	321	718	Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans OX=5476 GN=KRE6 PE=2 SV=1
sp|O13941|YEPB_SCHPO	7.18e-29	139	698	219	599	Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC23H3.11c PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000041	0.000004

TMHMM  Annotations     

Start	End
783	805