logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PPTG_12007-t26_1-p1

You are here: Home > Sequence: PPTG_12007-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_12007-t26_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
566 KI669589|CGC2 64001.31 5.4494
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:67 3.2.1.182:19 3.2.1.147:15

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 25 507 1.6e-137 0.986013986013986

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 1.02e-148 26 507 5 451
Glycosyl hydrolase family 1.
225343 BglB 1.19e-119 26 516 4 460
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 2.82e-89 5 500 7 476
beta-glucosidase
184102 PRK13511 3.23e-89 26 507 5 466
6-phospho-beta-galactosidase; Provisional
215455 PLN02849 3.99e-87 26 500 30 476
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.65e-251 6 555 5 567
2.12e-249 19 509 6 496
7.61e-211 17 510 14 507
3.25e-148 74 514 5 423
6.13e-104 26 512 4 458

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.82e-101 8 502 21 503
Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ4_B Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ5_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ5_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ6_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis],3WQ6_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis]
9.79e-99 26 502 22 513
Crystal structure of native Raucaffricine glucosidase [Rauvolfia serpentina],4ATD_B Crystal structure of native Raucaffricine glucosidase [Rauvolfia serpentina],4ATL_A Crystal structure of Raucaffricine glucosidase in complex with Glucose [Rauvolfia serpentina],4ATL_B Crystal structure of Raucaffricine glucosidase in complex with Glucose [Rauvolfia serpentina]
2.09e-98 26 502 22 513
Crystal of Raucaffricine Glucosidase in complex with inhibitor [Rauvolfia serpentina],3ZJ6_B Crystal of Raucaffricine Glucosidase in complex with inhibitor [Rauvolfia serpentina],4A3Y_A Crystal structure of Raucaffricine glucosidase from ajmaline biosynthesis pathway [Rauvolfia serpentina],4A3Y_B Crystal structure of Raucaffricine glucosidase from ajmaline biosynthesis pathway [Rauvolfia serpentina]
2.73e-98 26 502 22 513
Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity [Rauvolfia serpentina],3U57_B Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity [Rauvolfia serpentina],3U5U_A Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity [Rauvolfia serpentina],3U5U_B Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity [Rauvolfia serpentina],3U5Y_A Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity [Rauvolfia serpentina],3U5Y_B Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity [Rauvolfia serpentina],4EK7_A High speed X-ray analysis of plant enzymes at room temperature [Rauvolfia serpentina],4EK7_B High speed X-ray analysis of plant enzymes at room temperature [Rauvolfia serpentina]
1.69e-97 10 502 12 501
Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTK_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTM_A Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTM_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTQ_A Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTQ_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.72e-104 26 471 32 478
Beta-glucosidase 30 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU30 PE=2 SV=1
6.36e-100 2 502 5 500
Beta-glucosidase 30 OS=Arabidopsis thaliana OX=3702 GN=BGLU30 PE=2 SV=1
2.98e-99 26 500 37 505
Beta-glucosidase 32 OS=Arabidopsis thaliana OX=3702 GN=BGLU32 PE=2 SV=2
1.38e-98 26 500 19 485
Beta-glucosidase 27 OS=Arabidopsis thaliana OX=3702 GN=BGLU27 PE=2 SV=2
1.57e-98 26 513 34 513
Beta-glucosidase 28 OS=Arabidopsis thaliana OX=3702 GN=BGLU28 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000278 0.999723 CS pos: 20-21. Pr: 0.9671

TMHMM  Annotations      download full data without filtering help

Start End
529 551