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CAZyme Information: PPTG_10073-t26_1-p1

You are here: Home > Sequence: PPTG_10073-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_10073-t26_1-p1
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
186 20333.65 4.3023
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_10073-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 6 176 3.3e-57 0.6816326530612244

CDD Domains      help

PPTG_10073-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.67e-143 1 186 1 186
4.87e-133 1 176 1 176
7.67e-130 1 176 1 176
8.93e-129 1 176 1 176
6.77e-122 5 176 9 178

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.07e-28 20 176 1 164
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PPTG_10073-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000316 0.999669 CS pos: 19-20. Pr: 0.9697

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_10073-t26_1-p1.