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CAZyme Information: PPTG_10048-t26_1-p1

You are here: Home > Sequence: PPTG_10048-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_10048-t26_1-p1
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
190 21576.46 6.9985
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_10048-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 15 187 2.5e-49 0.7061224489795919

CDD Domains      help

PPTG_10048-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.50e-150 1 190 1 190
8.68e-150 1 190 1 190
5.02e-149 1 190 1 190
7.14e-149 1 190 1 190
4.13e-148 1 190 1 190

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.41e-25 25 184 1 171
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PPTG_10048-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000598 0.999365 CS pos: 18-19. Pr: 0.9235

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_10048-t26_1-p1.