CAZyme Information: PPTG_09662-t26_1-p1

Basic Information

• Species: Phytophthora parasitica
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
• CAZyme ID: PPTG_09662-t26_1-p1
• CAZy Family: GH28
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
776	KI669578|CGC2	84853.89	4.5564

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PparasiticaINRA-310	23240	761204	119	23121

• Gene Location: location=KI669578:897472-899802(-)

Full Sequence      

MLQSWLTAICSAAALTSAVTASDTYDAQAQAIVDGFSAEQLLGQMTQLNLGTVMNATTHE
LNETAVRSFAKQYVGSYFNTHWDKPVNGRFGFNASEFRSIVQRIQEISMEENGGHPIIYG
LDSVHGANYVEGSVLMPQPINSGASFNPDLVYEAARITARDTEAGGMSWIFGPILDVSQN
SLWARTLETLGEDPYLVSVMGAAVVRGLQSYNQTAACIKHFIGYSKTTTGHDKDNVNIPD
FDLLNYFMPPFKAAFEAGALTTMESYTSVNGDPVIASARLLNDLLRSDLGFNGVLLSDWG
EIYNLHDFHRVAATREEAVAMSLMQTSIDMSMVPNDAEFIKYGLNMLKENPDQETRLRES
VKRLIKMKLQLGLYDNPVPGEQYVSMVGNEKDEEVALEMARESIVLLKNDDDVLPLSKSA
SVFLTGHTADNVGFQCGGWTFTWQGHGGNDIFQHGISVRQGLENVVGNDSFTYFNGLLGN
GSISNADLAEAVQLANQHEYTIVAIGESNYAEKPGDIDDPALPEGQEKYVEALAATGTKV
IVILFEGRPRLLGSIPKNAVAIINGMLPCELGGQAMAEILYGDVNPSGKLPITYPKDPAN
IAIPYNHRVTTRCTWDNCWMQWDFGAGLSYTKFNYSAVTLDKTNIASADDTLTATVTVTN
TGKRAGKETVMLLLMQPFRKISVPEMKMLKKFKKIELQAGESMDVSFSLSTEDWGVYKPQ
IGSGLKRIVEDSRYIVAVKPDTWCNVYWGNLSNPLCAEFTIDTSSGAGTVSAGVEL

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	111	333	2.3e-60	0.9768518518518519

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	1.05e-116	5	742	3	754	beta-glucosidase BglX.
224389	BglX	1.66e-75	37	468	2	389	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
178629	PLN03080	3.14e-56	126	709	100	742	Probable beta-xylosidase; Provisional
395747	Glyco_hydro_3	5.65e-52	86	365	36	314	Glycosyl hydrolase family 3 N terminal domain.
396478	Glyco_hydro_3_C	1.97e-47	404	630	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	0.0	1	772	1	773
UIZ29613.1|GH3	0.0	1	764	46	822
UIZ29432.1|GH3	0.0	1	764	1	766
UIZ27116.1|GH3	2.96e-281	45	761	1	724
CCA27737.1|GH3	7.55e-278	32	761	71	808

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	1.88e-128	39	713	27	718	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
5Z87_A	1.44e-84	98	742	106	774	Chain A, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
6R5I_A	3.60e-82	116	721	73	705	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	1.86e-81	116	721	73	705	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	1.89e-81	116	721	74	706	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	6.89e-136	32	738	83	811	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	1.40e-127	39	713	49	740	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|Q56078|BGLX_SALTY	1.86e-85	26	712	35	728	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|T2KMH0|PLH24_FORAG	4.03e-85	100	738	50	706	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
sp|P33363|BGLX_ECOLI	9.65e-85	26	742	35	754	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.006733	0.993223	CS pos: 21-22. Pr: 0.7666

TMHMM  Annotations     

There is no transmembrane helices in PPTG_09662-t26_1-p1.