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CAZyme Information: PPTG_07616-t26_1-p1

You are here: Home > Sequence: PPTG_07616-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_07616-t26_1-p1
CAZy Family GH16
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
350 KI669572|CGC2 38318.55 4.2625
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 46 326 1.3e-75 0.9375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178113 PLN02497 6.36e-47 45 325 34 306
probable pectinesterase
178051 PLN02432 2.38e-45 45 328 13 275
putative pectinesterase
395871 Pectinesterase 1.71e-44 45 319 2 272
Pectinesterase.
215117 PLN02176 9.49e-43 45 328 41 313
putative pectinesterase
178098 PLN02480 1.59e-42 42 328 47 322
Probable pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.78e-152 1 350 1 338
4.45e-147 31 350 23 344
6.31e-147 31 350 23 344
9.66e-146 1 350 1 343
7.21e-142 28 350 18 338

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.07e-64 36 349 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.07e-64 36 349 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.67e-32 41 319 7 279
Pectin methylesterase from Carrot [Daucus carota]
1.10e-26 52 321 10 277
Chain A, Pectinesterase 1 [Solanum lycopersicum]
8.55e-11 143 313 155 366
The structure of rice weevil pectin methyl esterase [Sitophilus oryzae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.48e-82 36 350 19 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
7.02e-82 36 350 19 331
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
9.17e-66 37 349 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
9.17e-66 37 349 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
1.29e-65 8 349 8 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000186 0.999790 CS pos: 19-20. Pr: 0.9756

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_07616-t26_1-p1.