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CAZyme Information: PPTG_06253-t26_1-p1

You are here: Home > Sequence: PPTG_06253-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_06253-t26_1-p1
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
303 31573.47 4.2377
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_06253-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 265 1.8e-66 0.9346938775510204

CDD Domains      help

PPTG_06253-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.05e-172 1 303 1 303
5.77e-172 1 303 19 321
6.06e-172 1 303 1 303
1.16e-171 1 303 19 321
1.74e-171 1 303 1 303

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.33e-16 23 194 1 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PPTG_06253-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000281 0.999687 CS pos: 22-23. Pr: 0.9742

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_06253-t26_1-p1.