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CAZyme Information: PPTG_06241-t26_1-p1

You are here: Home > Sequence: PPTG_06241-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_06241-t26_1-p1
CAZy Family GH131
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
366 39406.47 4.1423
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 62 342 1.1e-74 0.9409722222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 2.07e-47 62 339 2 276
Pectinesterase.
178113 PLN02497 6.11e-44 59 343 31 308
probable pectinesterase
178051 PLN02432 2.83e-41 58 359 9 291
putative pectinesterase
178372 PLN02773 4.95e-41 57 364 2 299
pectinesterase
215357 PLN02665 5.29e-41 72 342 78 341
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.08e-167 41 366 18 344
1.43e-166 41 366 18 344
2.17e-166 47 366 22 347
2.13e-164 48 366 25 348
1.42e-162 48 366 26 348

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.33e-58 53 365 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
8.92e-58 53 365 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
8.30e-36 62 339 9 283
Pectin methylesterase from Carrot [Daucus carota]
5.98e-33 63 339 6 279
Chain A, Pectinesterase 1 [Solanum lycopersicum]
1.05e-12 63 353 7 336
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.36e-74 53 365 19 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
1.08e-73 58 366 24 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
6.57e-64 54 365 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
6.57e-64 54 365 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
1.03e-62 54 365 28 324
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000230 0.999724 CS pos: 20-21. Pr: 0.9779

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_06241-t26_1-p1.