CAZyme Information: PPTG_05659-t26_1-p1

Basic Information

• Species: Phytophthora parasitica
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
• CAZyme ID: PPTG_05659-t26_1-p1
• CAZy Family: GH1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
781		82763.62	8.0746

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PparasiticaINRA-310	23240	761204	119	23121

• Gene Location: location=KI669568:62614-64959(-)

Full Sequence      

MRLSSLNCLAGALLALTSVVTAQTYDAIVVGSGPGGLVAAEYLSRDSSVSVLILEAGPRS
LTATGGTDSPDYAQGRGLTKFDIPGEYDNIIYNGANEQYRVEWVSDAYMWLGKLVGGCSS
INAALYFRPPDSYVTNMQWPFSAAQMVSKMNENEQLHGHTDRPSPDGVWYTQEGYSIVSR
ALLARGYTERSINDAAARNSKSRTFGHAPFTFKNGKRDTPANAFWGQMSGRSNVRLLTGA
KVDYILRASGGKATGVVYNGGTQALLSTRGTVLMAAGALSTPKVLIQSGIGPSSQLNLLN
GRNGFPGVSQAAGWVTNANVGRNLFDTNVVFASFSHPQMSSFQYKNRPSWAINQYMNQGF
TGPWSSAGPTLISYENYDVQGRTYEFQSTALTNGFGEFYSRGNAFTLALYINNPEARAAS
GFDGNANWRAFNEGTPYFGTSRDLAALQSYAQRTVSAMVAQGATFLSAGSDDASVANWVA
ANRGLITHHFGGSCYASSNSADTRRCADERLRVIGMTNVFVADASAMRDGTVNPYGFVMY
IGREAADQAKTYIAANTGTSATCSTAENNIDYIGNDLTSRTSSTASGCCSICAATSGCRA
YSWNNYNGGTCWLKSAKGSTQSKSGVISATLNGGSTSTCTTIEENVDYTGNDVGNALSGT
AEGCCSICRARSDCKAYTWTNYNTGTCWLKSVKGAFTTKTGARSAQISSTSPTCTLVNNV
DYNGNDIGNSPSAAASGCCDSCRARSGCRAFTWTNYNGGTCWLKSQQGPGITVADAVSGT
I

Enzyme Prediction     

EC	1.1.99.18:3

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	17	547	5.2e-109	0.9726277372262774

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
225186	BetA	5.60e-37	18	555	1	539	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000	PRK02106	1.69e-19	21	326	2	298	choline dehydrogenase; Validated
366272	GMC_oxred_N	4.00e-14	107	326	19	215	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
238533	APPLE_Factor_XI_like	3.25e-12	637	705	3	70	Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
238533	APPLE_Factor_XI_like	5.36e-12	560	629	2	70	Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ20744.1|AA3_1	2.44e-271	7	631	10	637
AIG55859.1|AA3_1	1.29e-221	16	781	15	811
AIG55821.1|AA3_1	8.32e-208	15	778	14	807
AIG55589.1|AA3_1	1.88e-149	20	531	17	526
AIG55820.1|AA3_1	5.79e-140	7	542	6	542

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1KDG_A	7.43e-49	20	558	3	544	Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
1NAA_A	4.39e-48	25	558	3	539	Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
4QI4_A	3.22e-39	21	548	4	541	Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
4QI6_A	1.69e-38	21	548	226	763	Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
4QI7_A	3.85e-36	14	546	219	760	Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q01738|CDH_PHACH	6.74e-47	20	558	230	771	Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
sp|Q988C9|4PADH_RHILO	4.32e-17	22	547	4	531	4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1
sp|Q8D3K2|BETA_VIBVU	2.31e-15	23	525	3	505	Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1
sp|A0A248QE08|FAP_CHLVA	4.93e-15	17	527	76	613	Fatty acid photodecarboxylase, chloroplastic OS=Chlorella variabilis OX=554065 GN=FAP PE=1 SV=1
sp|Q7MF12|BETA_VIBVY	9.32e-15	23	525	3	505	Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000330	0.999659	CS pos: 22-23. Pr: 0.9798

TMHMM  Annotations     

There is no transmembrane helices in PPTG_05659-t26_1-p1.