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CAZyme Information: PPTG_04803-t26_1-p1

You are here: Home > Sequence: PPTG_04803-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_04803-t26_1-p1
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
268 KI669565|CGC1 28243.98 4.3494
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_04803-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 14 259 1.8e-62 0.9673469387755103

CDD Domains      help

PPTG_04803-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.79e-169 1 268 1 268
3.17e-168 1 268 1 268
6.31e-168 1 268 20 287
1.56e-157 1 268 1 260
4.90e-96 7 267 6 262

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.66e-17 72 188 50 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PPTG_04803-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000248 0.999726 CS pos: 22-23. Pr: 0.9626

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_04803-t26_1-p1.