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CAZyme Information: PPTG_04619-t26_1-p1

You are here: Home > Sequence: PPTG_04619-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_04619-t26_1-p1
CAZy Family CE5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
276 29518.36 4.3519
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.-:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 13 259 3.9e-67 0.9387755102040817

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
223033 PHA03291 0.002 187 272 182 266
envelope glycoprotein I; Provisional
183854 PRK13042 0.004 205 268 31 93
superantigen-like protein SSL4; Reviewed.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.81e-191 1 276 1 276
8.06e-191 1 276 1 276
7.73e-189 1 276 1 276
7.41e-187 1 276 1 276
1.53e-179 1 276 1 276

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.57e-96 24 196 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PPTG_04619-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000561 0.999404 CS pos: 23-24. Pr: 0.9713

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_04619-t26_1-p1.