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CAZyme Information: PPTG_04617-t26_1-p1

You are here: Home > Sequence: PPTG_04617-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_04617-t26_1-p1
CAZy Family CE4
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
496 54152.93 6.0905
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.-:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 57 230 1.8e-42 0.6530612244897959

CDD Domains      help

PPTG_04617-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.11e-211 1 299 1 299
4.38e-174 1 253 1 253
1.47e-154 1 253 1 249
9.00e-51 1 184 1 210
9.00e-51 1 184 1 210

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.61e-40 26 170 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PPTG_04617-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000228 0.999743 CS pos: 25-26. Pr: 0.9794

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_04617-t26_1-p1.