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CAZyme Information: PPTG_03160-t26_1-p1

You are here: Home > Sequence: PPTG_03160-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_03160-t26_1-p1
CAZy Family AA3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
379 38715.82 4.0272
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_03160-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 12 279 4.2e-73 0.9346938775510204

CDD Domains      help

PPTG_03160-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.01e-181 1 379 1 379
5.73e-180 1 379 1 379
8.13e-180 1 379 1 379
3.30e-179 1 379 1 379
3.81e-102 6 211 9 213

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.44e-12 98 193 70 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PPTG_03160-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000354 0.999625 CS pos: 20-21. Pr: 0.9784

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_03160-t26_1-p1.