logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PPTG_03147-t26_1-p1

You are here: Home > Sequence: PPTG_03147-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_03147-t26_1-p1
CAZy Family AA3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
287 30357.19 4.0959
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_03147-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 12 268 6.9e-66 0.9428571428571428

CDD Domains      help

PPTG_03147-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.42e-173 1 287 1 287
6.28e-173 1 287 1 287
5.15e-172 1 287 1 287
1.36e-126 17 188 1 172
7.14e-115 17 188 1 172

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.39e-10 83 198 43 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PPTG_03147-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000264 0.999689 CS pos: 23-24. Pr: 0.9771

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_03147-t26_1-p1.