CAZyme Information: PPTG_03139-t26_1-p1

Basic Information

• Species: Phytophthora parasitica
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
• CAZyme ID: PPTG_03139-t26_1-p1
• CAZy Family: AA2
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
320	KI669564|CGC7	33458.37	4.5294

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PparasiticaINRA-310	23240	761204	119	23121

• Gene Location: location=KI669564:492934-493896(-)

Full Sequence      

MVLGKASFTAIAASAMLASTVKGHGYMSVPKVEFTFNGDTTQYMATIEASSSGFSGNFGQ
SPTDNTANFNKGFAASKYSSLKEFMTDKMVLVSKDFTKECGYTNPDETPQPVPETYVEWS
HGSGEGFTASHEGPCEVWCDDTRVFQDDNCPKNFPTAPAKLPYDHDACLGSSRLSIYWIA
LHSPSWQVYINCAALEKTTSTGAKSKFAVGGSSGGAGNSTTPATDSSSSEQTTDSSSSTE
QTTDAPTAQTTDAPTSTEAPSTPSSPATDAPSTPSSPATDAPAPTEAPATESPVVTPAAD
TGASQTSDTSKCSVRRRRRN

Enzyme Prediction     

No EC number prediction in PPTG_03139-t26_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA17	11	275	1.7e-78	0.9755102040816327

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
237030	kgd	1.77e-08	228	311	37	118	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.
237030	kgd	5.08e-07	225	306	37	118	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.
236776	PRK10856	1.37e-06	225	309	148	241	cytoskeleton protein RodZ.
237030	kgd	1.65e-06	220	297	40	119	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.
237030	kgd	2.50e-06	228	308	34	114	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ETM41652.1|AA17	1.03e-176	1	320	1	320
ETO70368.1|AA17	4.18e-176	1	320	1	320
ETL88406.1|AA17	5.93e-176	1	320	1	320
ETP39589.1|AA17	8.42e-176	1	320	1	320
ETI41724.1|AA17	8.42e-176	1	320	1	320

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Z5Y_A	6.48e-13	24	195	1	170	Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits     

PPTG_03139-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000261	0.999694	CS pos: 23-24. Pr: 0.9780

TMHMM  Annotations     

There is no transmembrane helices in PPTG_03139-t26_1-p1.