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CAZyme Information: PPTG_03083-t26_1-p1

You are here: Home > Sequence: PPTG_03083-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_03083-t26_1-p1
CAZy Family AA17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
310 32375.57 4.9600
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_03083-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 25 192 3.1e-22 0.9880239520958084

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397269 LPMO_10 1.82e-06 95 193 87 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.19e-15 9 198 5 195
1.95e-14 18 198 14 195
5.57e-13 83 199 73 189
9.00e-13 25 198 18 191
9.00e-13 25 198 18 191

PDB Hits      help

PPTG_03083-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PPTG_03083-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000489 0.999488 CS pos: 24-25. Pr: 0.8422

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_03083-t26_1-p1.