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CAZyme Information: PPTG_03081-t26_1-p1

You are here: Home > Sequence: PPTG_03081-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_03081-t26_1-p1
CAZy Family AA17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
275 28862.76 8.6110
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_03081-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 22 189 5.8e-22 0.9880239520958084

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397269 LPMO_10 1.38e-07 22 190 1 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.87e-16 80 205 73 198
2.54e-16 1 195 1 191
2.54e-16 1 195 1 191
2.01e-15 7 210 5 204
3.84e-14 7 192 4 184

PDB Hits      help

PPTG_03081-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PPTG_03081-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.010133 0.989848 CS pos: 21-22. Pr: 0.9437

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_03081-t26_1-p1.