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CAZyme Information: PPTG_01152-t26_1-p1

You are here: Home > Sequence: PPTG_01152-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_01152-t26_1-p1
CAZy Family AA17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
262 KI669561|CGC6 28642.84 6.1385
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_01152-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 9 248 3.9e-71 0.9387755102040817

CDD Domains      help

PPTG_01152-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.25e-187 1 262 1 262
8.72e-186 1 262 1 263
7.17e-185 1 262 1 263
4.84e-183 1 262 1 263
2.26e-172 1 262 1 263

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.08e-16 22 191 1 171
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PPTG_01152-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000246 0.999723 CS pos: 21-22. Pr: 0.9780

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_01152-t26_1-p1.