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CAZyme Information: PPTG_01148-t26_1-p1

You are here: Home > Sequence: PPTG_01148-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora parasitica
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora parasitica
CAZyme ID PPTG_01148-t26_1-p1
CAZy Family AA17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
295 KI669561|CGC1 31240.16 4.3246
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PparasiticaINRA-310 23240 761204 119 23121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PPTG_01148-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 8 257 6.9e-75 0.9306122448979591

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
223021 PHA03247 0.004 184 285 2783 2885
large tegument protein UL36; Provisional
411345 gliding_GltJ 0.007 214 277 452 514
adventurous gliding motility protein GltJ. Adventurous gliding motility protein GltJ, also known as AgmX, occurs in delta-proteobacteria such as Myxococcus xanthus.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.14e-186 1 295 1 295
3.07e-183 1 291 1 291
1.54e-159 38 295 1 258
2.86e-148 26 295 59 327
9.14e-121 1 204 1 203

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.68e-21 20 190 1 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PPTG_01148-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000236 0.999773 CS pos: 19-20. Pr: 0.9809

TMHMM  Annotations      help

There is no transmembrane helices in PPTG_01148-t26_1-p1.