You are browsing environment: FUNGIDB
CAZyme Information: POW09547.1
You are here: Home > Sequence: POW09547.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Puccinia striiformis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Basidiomycota; Pucciniomycetes; ; Pucciniaceae; Puccinia; Puccinia striiformis | |||||||||||
| CAZyme ID | POW09547.1 | |||||||||||
| CAZy Family | GH47 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:3 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 154 | 286 | 1.5e-54 | 0.6844919786096256 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 2.59e-37 | 157 | 373 | 10 | 190 | Amb_all domain. |
| 226384 | PelB | 2.80e-19 | 39 | 425 | 14 | 327 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 4.02e-08 | 140 | 369 | 9 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| 404168 | Beta_helix | 0.010 | 176 | 256 | 21 | 94 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.36e-79 | 61 | 461 | 24 | 378 | |
| 1.45e-79 | 61 | 459 | 24 | 390 | |
| 6.99e-79 | 55 | 461 | 24 | 388 | |
| 9.02e-79 | 68 | 461 | 32 | 385 | |
| 9.02e-79 | 68 | 461 | 32 | 385 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.54e-60 | 63 | 411 | 9 | 313 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
|
| 3.04e-60 | 63 | 411 | 9 | 313 | Pectin Lyase A [Aspergillus niger] |
|
| 6.41e-59 | 63 | 411 | 9 | 314 | Pectin Lyase B [Aspergillus niger] |
|
| 9.38e-08 | 64 | 230 | 17 | 206 | Chain A, Pectate lyase [Bacillus subtilis],2O04_A Chain A, Pectate lyase [Bacillus subtilis],2O0V_A Chain A, Pectate lyase [Bacillus subtilis],2O0W_A Chain A, Pectate lyase [Bacillus subtilis],2O17_A Chain A, Pectate lyase [Bacillus subtilis],2O1D_A Chain A, Pectate lyase [Bacillus subtilis] |
|
| 9.38e-08 | 64 | 230 | 17 | 206 | Chain A, Pectate lyase [Bacillus subtilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.67e-72 | 61 | 416 | 27 | 340 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
|
| 3.67e-72 | 61 | 416 | 27 | 340 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
|
| 7.04e-71 | 61 | 461 | 28 | 383 | Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1 |
|
| 7.04e-71 | 61 | 461 | 28 | 383 | Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1 |
|
| 1.10e-69 | 61 | 461 | 26 | 378 | Probable pectin lyase F OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000567 | 0.999402 | CS pos: 20-21. Pr: 0.9670 |