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CAZyme Information: POW00324.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Puccinia striiformis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Basidiomycota; Pucciniomycetes; ; Pucciniaceae; Puccinia; Puccinia striiformis | |||||||||||
| CAZyme ID | POW00324.1 | |||||||||||
| CAZy Family | CE4 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.22:1 | 3.2.1.88:1 | 3.2.1.22:58 | 2.4.1.-:1 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH27 | 1538 | 1756 | 9.5e-37 | 0.8777292576419214 |
| GH27 | 329 | 476 | 3.3e-22 | 0.5807860262008734 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215149 | PLN02265 | 0.0 | 477 | 959 | 21 | 564 | probable phenylalanyl-tRNA synthetase beta chain |
| 273096 | pheT_arch | 6.01e-133 | 477 | 959 | 17 | 518 | phenylalanyl-tRNA synthetase, beta subunit. Every known example of the phenylalanyl-tRNA synthetase, except the monomeric form of mitochondrial, is an alpha 2 beta 2 heterotetramer. The beta subunits break into two subfamilies that are considerably different in sequence, length, and pattern of gaps. This model represents the subfamily that includes the beta subunit from eukaryotic cytosol, the Archaea, and spirochetes. [Protein synthesis, tRNA aminoacylation] |
| 236592 | pheT | 1.50e-114 | 474 | 955 | 18 | 512 | phenylalanine--tRNA ligase subunit beta. |
| 223150 | PheT | 1.21e-79 | 484 | 956 | 28 | 511 | Phenylalanyl-tRNA synthetase beta subunit [Translation, ribosomal structure and biogenesis]. |
| 269893 | GH27 | 8.16e-49 | 1414 | 1702 | 1 | 271 | glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 8.15e-134 | 478 | 957 | 22 | 549 | |
| 4.11e-73 | 1414 | 1933 | 29 | 544 | |
| 4.11e-73 | 1414 | 1933 | 29 | 544 | |
| 1.88e-72 | 1414 | 1933 | 29 | 544 | |
| 8.00e-71 | 1414 | 1933 | 27 | 536 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.22e-129 | 477 | 955 | 21 | 552 | Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_D Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_F Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_H Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_J Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_L Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_N Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_P Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens] |
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| 8.61e-68 | 476 | 955 | 21 | 574 | Chain B, Phenylalanyl-tRNA synthetase beta chain, putative [Plasmodium vivax] |
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| 4.32e-67 | 483 | 955 | 27 | 579 | Chain B, Phenylalanyl-tRNA synthetase beta subunit [Plasmodium falciparum],7DPI_D Chain D, Phenylalanyl-tRNA synthetase beta subunit [Plasmodium falciparum] |
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| 2.23e-30 | 1414 | 1746 | 9 | 313 | Chain A, alpha-galactosidase [Oryza sativa] |
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| 2.06e-28 | 1414 | 1755 | 9 | 324 | Nicotiana benthamiana alpha-galactosidase [Nicotiana benthamiana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.16e-147 | 478 | 958 | 22 | 552 | Phenylalanine--tRNA ligase beta subunit OS=Candida albicans OX=5476 GN=FRS1 PE=2 SV=3 |
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| 2.45e-142 | 478 | 959 | 22 | 556 | Phenylalanine--tRNA ligase beta subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FRS1 PE=1 SV=3 |
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| 2.42e-140 | 478 | 957 | 22 | 548 | Phenylalanine--tRNA ligase beta subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=frs1 PE=3 SV=1 |
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| 2.06e-137 | 477 | 955 | 21 | 553 | Phenylalanine--tRNA ligase beta subunit OS=Caenorhabditis elegans OX=6239 GN=fars-3 PE=3 SV=2 |
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| 6.30e-129 | 477 | 955 | 21 | 552 | Phenylalanine--tRNA ligase beta subunit OS=Homo sapiens OX=9606 GN=FARSB PE=1 SV=3 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.999791 | 0.000223 |